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… Students can apply for internships and work onsite with an experienced researcher who serves as their mentor. … experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at the JGI through three different … Jacobs participated in the SEED Scholars @ LBNL program,  with support from  the SEED program at UC Berkeley. Sally …

… of California Santa Barbara. So plants don’t break down without a fight, but it’s an important battle to fine-tune. … the energy they store.      Since 2012, O’Malley has worked with the JGI to understand the enzymes these organisms use … a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, O’Malley and …

… a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using proteins on … at the JGI, thinks that if you’re a virus or a microbe with a DGR, you gamble every time you mutate. But, perhaps, … research scientist, found that pieces of viruses with DGRs were found, on average, in double the number of …

… carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, … two cell types [of two different organisms] are interacting with each other, without all the noise or other biological …

… amount of what’s allowed in drinking water. However, in the deeper sites, toxic chemicals remain.  To identify the …

… the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking … the key physiological factors that trigger forest mushrooms with diverse trophic modes to convert from vegetative …

… such tools has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI — along with the National Energy Research Scientific Computing … To put these efforts into perspective, we caught up with JGI staff, collaborators and users to see how software …

… (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to make … University describe a two-pronged approach that starts with engineered yeast cells but then moves out of the cell … products in industry.” From Cell to “Soup” The work started with yeast strains engineered by Alper’s team to convert the …

… under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and … interfaces they have come to rely on from Phytozome, with a more intuitive interface, deployed on much more … happen to Phytozome v12 URLs after August 6th? All URLs with a domain of  https://phytozome.jgi.doe.gov will be …

… that methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” … the other five only distantly related to known methanogens. With the help of this information, the researchers found … genes that serve as a core set of genes present in archaea with metabolisms involving methyl-coenzyme M reductase …

… the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … set of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … *The HudsonAlpha Genome Sequencing Center works with scientists at the JGI a lot. In fact, HudsonAlpha …

… Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants.  Science, 2011; 332: …