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Single-cell genomics reveals complex microbial and viral associations in ciliates and testate amoebae
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Multi-omics reveals nitrogen dynamics associated with soil microbial blooms during snowmelt
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Massie S. Ballon
… outreach efforts, the team aims to broaden awareness of and access to JGI public resources and the DOE mission, as well … coverage of JGI-enabled science highlighting user research, newly accepted proposals, and outreach efforts.  …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although … discovered and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often … of Science User Facility, has been developing and applying new genomics capabilities that address these issues. Check …
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Soil virus offers insight into maintaining microorganisms
… to another, which can have a significant impact on the microbial communities within soil. Using metagenomics, … sequences were retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG … science FICUS initiative, which allows researchers to access capabilities of the JGI and the Environmental …
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Kjiersten Fagnan
… participant, 2021 Member of the Networking and Information Technology Research and Development (NITRD) Program Chair of …
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Atif Shahab
… BS in Electrical Engineering, University of New South Wales, Australia; MS in Computer Science, University of New South Wales, Australia …
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Crysten Blaby-Haas
… AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev Micro 22, 63. Davidi L, Gallaher … aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature 608, 38-39 (2022) and …
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JGI@25: Strengthening Soybean
… to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence up to date with current technology.  In addition to supporting work on the soybean …
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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