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… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … to produce desirable traits.  Partly enabled by the JGI  Community Science Program New Investigator program , … Foundry and the Joint BioEnergy Institute (JBEI.) The JGI team measured the levels of gene expression in the …

… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started … staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as representatives highlighted the benefits of this collaboration.  JGI Director Nigel Mouncey reflected on how the JGI-UC …

… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research … Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. 2021. Persistence and plasticity …

… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and … to fit the needs of the dynamic environment that is JGI. Infrastructure built by his team is unbureaucratic and …

… and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific … Academy of Sciences of the United States of America 109(3), 805–810 (2012).  Sneddon, MW, Faeder, JR, and …

… from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone … year and continue working on their research project! The JGI-UC Merced internship program was founded in 2014 with … Implementing a Scalable JGI-RQC Pipeline on the Cloud …

… least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … Robert Schmitz at the University of Georgia and including JGI researchers conducted the largest analysis to date of …

… closest relative S. paradoxus at high temperatures (39°C/102°F). The Impact One of the challenges in understanding … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The …

… Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the … (MAO), US Army Research Office contract W911NF-19-1-0010 (MAO), National Science Foundation grant MCB-1553721 …

… applications that span the lifecycle of activities at JGI - proposal submission and review, project and work order … align and reach the associated goals. Mr. Wilson joined the JGI in 2002.  A fter supporting the sequencing core at Exelixis Biopharmaceuticals as an intern, he joined the JGI as an Instrumentation Engineer where he added structure …

… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … superphylum of extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally …

… and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …