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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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Host species and geographic location shape microbial diversity and functional potential in the conifer needle microbiome
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Reduced methane emissions in transgenic rice genotypes are associated with altered rhizosphere microbial hydrogen cycling
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in name first … Researchers have the opportunity to combine the power of genomics and molecular characterization offered at multiple …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… precise gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid … biomaterial manufacturing.  Summary Auxenochlorella UTEX 250-A provides an unprecedented foundation for metabolic … oil production. The organism uses specific chemical tags on DNA  to control which genes are active. Researchers …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …
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Plant Pan-Genomics Comes of Age
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FICUS
… available from all the facilities participating in the FY25 call, introduces the available APS resources, and contains … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo … in presentations on their work delivered during the 5th anniversary celebration of the internship program. … JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further …
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JGI Announces 2023 Community Science Program Awardees
… of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, understanding …
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JGI Announces 2025 New Investigator Portfolio
… a list of researchers whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will … and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, … the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November 2025 review. You can also …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome … Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research interests …
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