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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of Science user facility with broader national efforts to …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be … to provide plants with nutrients and pathogen protection. Specifically, gene expression in that set, implicated in AMF …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of nutrients in these systems.” -Mike Wilkins, Colorado …
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Calculating the Costs of Multiple Switchgrass Gene Copies
A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team … to climate adaptation and range expansion. This would subsequently represent a valuable breeding resource for …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … fern’s distant cousin. Ceratopteris richardii, or C-fern, specifically has been studied in plant research laboratories … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern …
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Training the Next Generation of Talent
DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … Johnson in Wang’s group on developing an algorithm for RNA-Seq assembly. RNA-Seq is a technique for profiling the small fraction of a …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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JGI & KBase at PAG XXVII
… your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant systems that make use of these resources will …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … stressors, um, alter microbial biomass and then what the consequences are for the ecosystem. ALISON:  So, Ed is trying … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … hone science presentation skills, and participate in professional development enrichment activities. For some … Data Metagenomic Clustering Scalable … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …
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