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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  … and postdocs (including LBNL students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the … Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … matching these viral genetic sequences to their hosts is crucial to understanding what these viruses can do. … pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, …
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JGI Announces 2026 Functional Genomics Recipients
… state-of-the-art functional genomics research from scientists who translate genomic information into biological function. Through our CSP Functional Genomics … Below find a list of the 17 researchers accepted for 2026. Proposals are accepted year-round; the next deadline …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley … to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying Zhang of the University of Rhode Island), … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … have developed and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to … of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth … National Laboratory, Rebecca Smith of the University of Wisconsin, Maggie Sogin of the University of California, …
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JGI Announces 2025 New Investigator Portfolio
… Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest … a list of researchers whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold … produces an estimated 5% of annual greenhouse gas emissions. Understanding how sphagnum, a primary component of … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria … communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope … Work at Lawrence Livermore National Laboratory was conducted under the auspices of the U.S. DOE under …
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Access to Rock Star Scientists
… Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved … plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified …
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Building Wet and Dry Lab Skills
… the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training … Genomics Group to study the effects of  Brachypodium distachyon plant root exudates on the plant microbiome. This … And they have learned a lot I think. And they can do like independent work right now. Yeah. Yeah. They're amazing. …
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