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… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific …

… In this episode, undergraduates adopt genomes that the JGI … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about …

… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow …

… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial … producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …

… Jasmyn provides bioinformatics tools and analysis support for user science, … and collaboration, she works to develop and improve supporting pipeline efficiency through streamlined workflows, … reliability, thereby accelerating critical insights for the JGI User community. …

… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … to produce desirable traits.  Partly enabled by the JGI  Community Science Program New Investigator program , …

… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the …

… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Pictured from left: [Top row]: Romy Chakraborty, Dawn Chiniquy, Anne Glaesener, Steven Hallam, Marc Hanikenne, … 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative … Biological and Environmental Research (BER) program, the JGI provides advanced genomic capabilities and access to …

… Uncovering associations between plant roots and fungi that can help … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Communications paper . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s …

… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few …