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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the … for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the world have collaborated with the U.S. Department of Energy … 824 new GEBA-Actino genome sequences were combined with nearly 5,000 publicly available ones and 1,100 …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … optimize their code on GPUs. While the  OLCF is organizing nearly a dozen hackathons around the world in 2019, only the …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant … of the fifth summer of its flagship education program with UC Merced. JGI Director Nigel Mouncey and program …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … more than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… mix-and-match characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently … future, the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — … separately for billions of years have some common signatures of muli-substrate specificity. However, different …
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Access to Rock Star Scientists
Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research culminated in presentations on their work delivered during the 5th anniversary celebration of the …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing … niche partitioning among sympatric soil bacteria. Nature communications, 6(1), 8289. Yao, Y., Sun, T., Wang, …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis … the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for …
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An Integrated Dataset to Understand Ecosystem Interaction
… soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data set  outlined …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve … Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and …
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