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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing … and Development Program Awardee 2005-2009: NIH K25 Mentored Career Development awardee 1998-2003: NSF Graduate research training fellowship in … using mass spectrometry imaging. Analytical chemistry, 89(11), 5818–5823. Baran, R., Brodie, E., Mayberry-Lewis, …
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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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Olpidium, The Key to the Origin of Terrestrial Fungi
… virus LBVaV; genus Varicosavirus ) which may severely reduce crop yields. Like the typical chytrids and other … remained largely untouched until seven years later. In 2018, as members of the ZyGoLife consortium , my colleagues and … events when fungi first invaded land. Intuitively, it makes much sense. Transition to the terrestrial ecosystems …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… to date.  This summer internship program, which began in 2014, pairs undergraduate and graduate students from UC … & Li Lei Lorenzo Scaturchio & Benjamin Cole Sarina Qin & Frederik Schulz Sidharth Babu & Zhong Wang   By Ashleigh Papp …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So …
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Trent Northen
… Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership roles within large … 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  p.eadg7888. DOI: 10.1126/sciadv.adg7888 Treen D, et al.  SIMILE … 2016 Berkeley Lab Director Exceptional Achievement Award 2014 DOE Early Career Award 2013 R&D100 Award 2009 …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … in flowering plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. Mondo, José F. … microsporus." Nature Communications 16, no. 1 (2025): 3843. McCahill, Ian W., Logayn T. Abushal, Bahman Khahani, …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… of principle study built off earlier approaches and offered a way for researchers to study the planet’s microbial … diversity, much of which remains unknown and uncultured in laboratories. Other firsts followed. The next year, … the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green …
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Draft Genome Sequence of Methyloferula stellata AR4, an Obligate Methanotroph Possessing Only a Soluble Methane Monooxygenase
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Meeting report: International soil virus conference 2024
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JGI@25: From Life at the Extremes to Editing Genomes
… CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos … has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated proteins … important.” Related Publications:  A scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug …
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Jeremy Schmutz
… polyploid genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., … 9: 5213. Huang, P et al. 2017. Sparse panicle1 is required for inflorescence development in Setaria viridis and … Nature Plants 3:17054. Schmutz, J, & McClean P et al. 2014. A reference genome for common bean and genome-wide …
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