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Natural Prodcast Episode 2: The Primer, Part 2
ALISON: It sounds like it’s kind of like our endocrine system or hormones in a way too. Like in a maybe analogous … One of the organisms that I studied in the past were a group of bacteria called the Frankia . And so the Frankia … Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more information on …
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Mission
… in studies of complex biological and environmental systems. We optimize our service to the community through … of Science User Facility at Lawrence Berkeley National Laboratory ( Berkeley Lab ) and part of the Biosciences … of genome biology and develop the genome-scale engineering technologies needed to design, build, and …
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Metabolomics Program
… works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with … understanding the critical roles of metabolites in living systems, particularly as they relate to DOE missions in the …
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Disclaimer
NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect to documents available from this server, neither the United States Government …
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Partnerships: Myco-Ed
… hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and … Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics … and potential applications. … The Department of Energy Systems Biology Knowledgebase (KBase) is involved in the …
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Partnerships: Adopt-A-Genome
… datasets.  … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, comparative … datasets. It includes JGI-sequenced and publicly available datasets encompassing >150,000 isolate genomes, … genomes and associated resources/tutorials is freely available, and any faculty from any institution interested in …
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Publication Policy
… result in scientific publications. JGI users and collaborators have the right to produce manuscripts for … genomics data types as well as in advanced assembly and engineering strategies for DNA synthesis applications. If … of publications and allowing connections between all systems to maximize the impact of user research. The crucial …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… previously retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant … Associate Director of Science; Todd Anderson, Biological Systems Science Division Director; and Ramana Madupu, BER … Institute and Deputy for Operations Biological Systems & Engineering Division. “I feel so lucky that I get to have …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… but also those molecules that mediate a well functioning ecosystem and environment and earth. So yeah, it’s like these … in graduate school, I worked in Professor Craig Townsend’s lab . And I hope we get Craig on here at some point. I’ve … small peptide. So at a certain point, a couple of different groups noticed that they could take all of these adenylation …
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Data Ecosystem
… environments. … KBase is a critical partner in enabling systems biology analyses, such as metabolic modeling, that … from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are … System Biology Knowledgebase … National Microbiome Data Collaborative …
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Natural Prodcast Episode 1: The Primer, Part 1
Science User Facility located at Lawrence Berkeley National Laboratory. Being a User Facility means that scientists from … Metabolites Science Program here at JGI. It’s a new group formed under the director who has also got a long … that I think might illustrate some of that. So first, put a picture in your head. It’s a warm summer day, it’s been dry …
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Natural Prodcast Episode 18: A CSP Primer
… and scientific research, especially at US National Labs, like Lawrence Berkeley Lab (that’s LBL), the National … to inoperate the data and pursue their science more efficiently. DAN UDWARY: Yeah. I’m just going to make the … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish …
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