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Tina Clarke
… Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in … Compensation Analyst and Human Resources Partner, June 2017 –  present Sr. Compensation Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … in flowering plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. Mondo, … Education …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … 1. Swift CL, Louie KB, Bowen BP, Olson HM, Purvine SO, …
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Mike Sneddon
… library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). … Education …
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Benjamin Cole
… University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Education …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and … virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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Igor Grigoriev
… over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm … by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in soil … microbiome diversity and function.  Nature Microbiol. 7(9):1419-1430. Ye et al (2022) The role of zinc in the adaptive …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β-Linked GlcNAc … R&D100 Award finalist 2019 SIMB Young Investigator Award 2013 …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome … co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in … genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., Lovell, …
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Rex Malmstrom
… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. … of the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized …
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Nikos Kyrpides
… (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. … RNA virome reveals diverse clades of bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic …
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Dan Rokhsar
… group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the faculty of University of … 2018 Marthella Foskett Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council 2009 …
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