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… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity … across at least two of the facilities, and generate datasets beyond what each of these facilities could generate … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s …

… now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the … little vague to me. What do you mean by putting a bunch of tools in one package? DAN UDWARY: Oh, sure. So if I wanted … you see sometimes. So pretty recently, Merck put out some software called DeepBGC , which is a machine learning tool …

… National Lab’s (Berkeley Lab’s) core values , which guide the relationships we nurture in our workplace and seek … transparently, and ethically; Act on behalf of the JGI user community rather than personal agendas; Treat all other … Visel, Deputy for Science Programs Tanja Woyke, Deputy of User Programs …

… by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and … characterization methods, in addition to bioinformatics tools to elucidate phage function in this tripartite … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the …

… the idea of taking all the different natural products data that there is and putting things, coalescing them, so … that I’ve appreciated since starting my own group is these tools, in terms of looking at the chemistry produced by … of Energy Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National Lab. You …

… Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the … of Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological function.   To jointly …

… DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the complex, high-dimensional data (the 136 tetranucleotide frequencies for each of the …

… published. The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … identify those who contributed significantly.    Authorship Guidelines JGI will provide all users with a list of JGI …

… Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology … (NMDC)—to provide access to datasets, workflows, and tools to seamlessly expand data functionality. Close partnerships with other user facilities enable the ability to leverage their …