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Philympics 2021: Prophage Predictions Perplex Programs
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A User-Centered Approach to Accessing JGI Data
… requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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A Community Resource for Secondary Metabolite Researchers
… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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The Expanding Universe of Methane Metabolisms in Archaea
… the JGI’s 14th Annual Genomics of Energy & Environment Meeting. Registration for both the NeLLi Symposium and for the JGI Annual Meeting closes on March 11, 2019. Novel Yellowstone archaeon …
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Computationally Classifying Fungal Lifestyles
… (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… more than 10 papers, including two Nature Plants publications, in five years, have come out of the … and construction, providing a unique resource for the international community and fostering academia-industry …
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JGI Accepts 17 Proposals for Community Science Program
… other biorefinery products. The work builds off a previous international collaboration that produced the reference …
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Ian Blaby
… coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a custom high-throughput … and future challenges. Synthetic Biology . 5: 1. 2020 Nguyen et. al., ManiNetCluster: a novel manifold … Biology JGI Co-chair, People Stewardship committee (2020-2022) UCLA Molecular Biology Institute Postdoctoral …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … machine “learned” to identify a certain type of bacterial viruses or phages called inoviruses, which are filamentous viruses with small, …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Institute (JGI) Annual Genomics of Energy & Environment Meeting, to be held in person at the Walnut Creek Marriott …
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JGI Hosts GPU Hackathon in May
… the JGI hackathon is particularly focused on developing bioinformatics applications instead of on simulation codes. …
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Jeremy Schmutz
… switchgrass. Nature 590: 438-444. Mamidi, S et al. 2020. A genome resource for green millet Setaria viridis … loci. Nature Biotechnology 38:1203-1210. Chen, ZJ et al. 2020. Genomic diversifications of five Gossypium … model plant Setaria. Nature Biotechnology 30: 555-561. The International Brachypodium Initiative. Genome sequencing and …
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