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Secrets of the Needles: What Microbes do on Conifer Leaves
… surface of plants, is a comparatively understudied area of forest ecosystems as past studies have mainly focused on … work, enabled in part by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the current version of the genome is assembled into sequences of 5.5 million basepair (bp) in length, while the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, … Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel …
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A One-Stop Shop for Analyzing Algal Genomes
… data scientist Alan Kuo at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism may …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s Microbial …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … and the JGI. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs) have expanded the … Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human chromosome 19 The DNA …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… areas that require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, … samples from wells at the site in 2007, 2009, and 2010. DNA was extracted from the samples that were sequenced by … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources … Links to experimental resources and background information are available here . …
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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