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Understanding Wildfire Recovery, Starting in Soil
… This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed … supported by the National Science Foundation (awards ACI-1532235 and ACI-1532236), the University of Colorado Boulder …
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JGI at the AGU Fall Meeting
… User Facilities in One Proposal via FICUS December 13 8:12 am Convention Center eLightning Theater IV: Kuno Kasak, … Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential in Sacramento-San Joaquin Delta, California” December 14 8:05am Convention Center, Rm 231-232: Josue Rodriguez-Ramos, Colorado State University …
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Mindfully Moving JGI
… after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce … Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 single-story buildings to a new 4-story building 20 miles away in another city and county began more than …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… of the library. 6mA and 4mC (~50x depth), 5mC (~250x depth required). Methylation detection currently only … well for 6mA and 4mC (~50x depth), and can detect 5mC (~250x depth required). Q:  Can DNA modifications be detected …
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DAS Tool for Genome Reconstruction from Metagenomes
… of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … Interpretation (CAMI) Challenge, a competition launched in 2015 by a community initiative, with varying numbers of … draft genomes to >70% completeness. Of those 79 genomes, 26 were high-quality draft genomes with >90% completeness. …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… (Berkeley Lab) took on the Open Green Genome Initiative in 2018 as part of its Community Science Program. The OGG has … over seven million repetitive elements that account for 85.2% of the C-fern assembly. While they did identify a couple … US Department of Energy operated under Contract No. DE-AC02-05CH11231.This work was supported by US National Science …
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Cultivating Symbiotic Antarctic Microbes
… to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, … outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the … was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program (project …
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A Grass Model to Help Improve Giant Miscanthus
… and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. The collection of the M. sinensis and M. sacchariflorus …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited Researchers from the JGI recognized for …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… summer project in the JGI-UC Merced Internship Program. In 2023, Shayna Bennett, a UC Merced graduate student in Carolin … by the National Science Foundation (NSF) under grant DEB-1442348. The work (proposal:  https://doi.org/10.46936/10.25585/60000936 ) conducted by the U.S. Department of Energy …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231. …
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Graduate Students Get Thesis Research Opportunity at the JGI
… of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of their thesis research at 12 host national laboratories or facilities between 3-12 consecutive months. Their proposed research projects …
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