Results

Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
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Association of functionally significant Melanocortin-4 but not Melanocortin-3 receptor mutations with severe adult obesity in a large North American case–control study
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2022 Progress Report
… the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … of the JGI is to provide the global research community with access to the most advanced integrative genome science …
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help … can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. …
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Taking Stock of the Known and Unknown Microbial Space
… Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all … information is still computationally derived. Experimental studies on cultivated isolates are needed to convert the …
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Webinar: PhycoCosm Tutorial
… not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If … is based on a model that is not based on a genome model with PhycoCosm, how do we go about getting it in your … have some reference plant genomes to help with comparative studies of algae and we have various protists such as …
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… in urine to create hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was … partnership that combines the JGI’s genomic capabilities with the Foundry’s nanoscale materials research. As … could also be produced from urine while also potentially reducing the typical energy production costs associated. …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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JGI@25: From Life at the Extremes to Editing Genomes
… National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle Charpentier of the Max Planck Institute! … For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining … Working with the JGI, Banfield is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals … State University and colleagues aim to understand how soil microbiomes in fire-adapted ecosystems respond to low and … a full-scale submission. She aims to look at the microbial methane cycle in terrestrial geothermal environments. …
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