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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US Department of … to give his students this experience. My current career path was heavily influenced by my own high school biology …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s … breaking our methods was these damn secondary metabolite pathways. So that’s kind of how I fell down the rabbit hole. … from really being functional was these secondary metabolite pathways. So why was that? What is it about secondary …
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Charting Progress toward Professional Goals
… at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of STEM … and apply their newfound knowledge to future career paths.  To learn more about their summer internship … internship changed, in your mind, anything about the career path that you might want to take going forward? Do you …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … tools beyond biomass breakdown, extending into biochemical production.    Over time, as these projects have delivered … and porting parts from nature — enzymes, transporters, pathways — into microbes that we do know, to advance our …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … environmental challenges. Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a powerhouse. … study subject that could lead to more sustainable energy production.  However, less than 10% of the microbes found in …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… Michelle O’Malley and Tom Lankiewicz of UC Santa Barbara discuss the importance of … presumption on its head and opens up a new avenue to explore for efficient biofuel production. …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   … System (LIMS) and temporary shut down of the sequencing production line to accommodate data migration requirements. …
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Webinar: MycoCosm Tutorial
… fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? … download file formats are predefined but can certainly be improved in future developments of the portal. 14.  Q: Has …
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Matt Blow
… Genome Assembly, QA/QC, and User Support Analysis teams. Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the … editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at what cost?  A … restoration and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial …
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Leo Baumgart
… the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the … operationalizing new genomic technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods into production workflows. He developed and scaled the …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national … Access to the Molecular Foundry and use of JGI capabilities is … they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for covering the costs of the …
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