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Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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A second special issue of Standards In Genomic Sciences from the Genomic Standards Consortium
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  … support was provided by the National Center for Research Resources (NCRR) (5P20RR016480-12) and the National …
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Jeremy Schmutz
… Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid … Nature Biotechnology 38:1203-1210. Chen, ZJ et al. 2020. Genomic diversifications of five Gossypium allopolyploid … Nature Genetics 52: 525-533. Lovell, JT et al. 2018. The genomic landscape of molecular responses to natural drought …
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DAS Tool for Genome Reconstruction from Metagenomes
… changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture … complexity. The environmental datasets included metagenomic data from Crystal Geyser in Utah (work also done by …
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Natural Prodcast Episode 3: The Primer, Part 3
… of biology. You know, I’ve personally been able to work in genomics, in protein structure, in synthetic biology, …
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JGI Announces 2023 Community Science Program Awardees
… success. “ The CSP Annual Call is focused on large-scale genomic science projects relevant to the DOE’s Office of … of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, understanding …
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Three Join the JGI User Executive Committee
… will help the JGI shape its programs, capabilities, and resources to best meet the broad base of user community … has served on review panels for the JGI’s Functional Genomics CSP and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA …
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Better Crops With a Pointillist Approach to Plant Genomics
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… aims to create pipelines, tools and other standardized data resources that the global research community can access and … data have been sequenced and assembled through the combined resources of the JGI, NERSC and ExaBiome teams. Part 1: … the basis of their behavior in the environment. Large metagenomic surveys could lead to better predictive models of …
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