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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … technological developments leveraging recent progress in AI/ML that will enable researchers to discover novel lineages … Immediately following the NeLLi Symposium, join us for a 1.5–day jamboree on November 6–7 focused on improving …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal portal  MycoCosm . …
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New and Improved: Eucalyptus Reference is Now Accessible
… improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … were conducted by the JGI, along with genome assembly and annotation. Genome contiguity of the 2025 phased reference …
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Learning to Look
… answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … work also used resources of the  National Energy Research Scientific Computing Center , another DOE Office of Science … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – according to plan but unbeknownst to Ray and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene … Laboratory (Berkeley Lab). Researchers used a library-based approach to fine-tune gene expression. They tested … This work was funded by the Air Force Office of Scientific Research under Award No. …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … aim is to generate high-quality genome assemblies and annotations for 35 species representing all major … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … ago. As sequencing technologies have advanced, assembly and annotation of the genome sequence has improved in parallel. …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … for users to publicly engage with each other, share annotations and collaborate on solutions.  Compared with …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Ben Bowen
… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. … chemoinformatics, and bioinformatics facilitates impactful scientific discoveries, supporting the DOE’s Biological and …
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … being conducted through the  Belowground Biogeochemistry Scientific Focus Area (SFA), supported by the Terrestrial …
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