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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of archaeal symbiotic … archaea but rather symbionts. Cavicchioli’s graduate student, Joshua Hamm, successfully cultured two strains of …
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New and Improved: Eucalyptus Reference is Now Accessible
… The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … on the E. grandis reference genome published in 2014 by a team led by University of Pretoria scientists with help from … including first author Anneri Lötter, a graduate student in Zander Myburg's lab, aimed to provide an improved …
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When “The Blob” Made It Hotter Under the Water
… impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … that the heatwave caused the microbial populations to cluster along the water column, like layers in a cake. …
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DAS Tool for Genome Reconstruction from Metagenomes
… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving methods … samples. The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC … The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short Palindromic Repeats … DNA. Co-first author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s lab, and …
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Digging into Microbial Ecosystems Deep Underground
… and microbiome researchers Mike Wilkins and his graduate student Kaela Amundson at Colorado State University have … deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re … have tapped into the resources and capabilities of both the JGI and the Environmental Molecular Science Laboratory …
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Examples: Successful LOIs & Submissions
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Integrating Experimentation with Data
… fees:                   General attendees: $500     Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … The JGI and EMSL are U.S. Department of Energy (DOE) Office of …
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Mike Sneddon
… Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: … requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the global …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, … plants? If yes, we are based in South Africa, How can this team be of help to us in research design and execution? A:  …
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Ben Bowen
… Nature communications, 6(1), 8289. Yao, Y., Sun, T., Wang, T., Ruebel, O., Northen, T., & Bowen, B. (2015). … decompositions. Analytical chemistry, 87(9), 4658–4666. Wang, Y., Kora, G., Bowen, B., & Pan, C. (2014). MIDAS: a … imaging. Analytical chemistry, 85(21), 10354–10361. Hwang, H., Bowen, B., Lefort, N., Flynn, C., De Filippis, E., …
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