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New and Improved: Eucalyptus Reference is Now Accessible
… eucalyptus genome assembly generated using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … South African team collected the plant tissues. DNA and RNA sequencing were conducted by the JGI, along with genome …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led to the identification of key microbial culprits in carbon fixation in the dark ocean. Combining single cell … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …
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From Competition to Cooperation
… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are three types of fungal … species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  genomes …
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Kjiersten Fagnan
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Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans
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Long-term warming modulates diversity, vertical structuring of microbial communities, and sulfate reduction in coastal Baltic Sea sediments
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… of genome biology, and develop genome-scale engineering technologies to control plants and microbes for bioproducts … genome assembly, researchers offer a gapless end-to-end sequence of complete chromosomes. Auxenochlorella solves a … RJC was supported for his work on  Auxenochlorella genome sequencing and assembly in Berkeley, in part, through the …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  … pathways control specific cell types. “A lot of these technologies were designed for samples from humans or mice,” … of genome biology and developing genome-scale engineering technologies to produce biofuels and bioproducts. “We …
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Genome sequence of the Litoreibacter arenae type strain (DSM 19593T), a member of the Roseobacter clade isolated from sea sand
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Baltic Sea coastal sediment-bound eukaryotes have increased year-round activities under predicted climate change related warming
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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