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Applying Viral Genomics Expertise to Understanding the Human Virome
… to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … asked and whether they are within DOE mission areas of bioenergy, carbon cycling, and biogeochemistry. This is a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … Lawrence Berkeley National Laboratory researchers were studying Chromosome 5, which contains about 6% of the human …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and … di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … also regulates enzymes involved in cellulose production in microbes, these biosensors may eventually lead to ways to …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow … novel flow cytometry protocols for targeted recovery of specific microbes. …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … to integrate large genetic payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … to bioremediation efforts for decades. Identifying resident microbes that can help bioremediate toxic substances has led …
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