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Kanwar Singh
JGI users by processing their single cell samples using our high throughput pipeline. He also explores new methods for creating sequencing libraries and optimizing various processes. …
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Trent Northen
… in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for … Executive Education, UC Berkeley Haas School of Business DOE Oppenheimer Science and Energy Leadership … Novak, V, et … (16), 567–571 (2019) doi: 10.1038/s41592-019-0465-0. Couradeau E et al. Probing the active fraction of soil …
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A Step Toward Controlling Soybean Rust
… reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program … Institute for Agricultural Research (INRA)  proposed sequencing a reference genome for  P. pachyrhizi to develop … working to address some of the most pressing challenges of our time. For more information, please visit  …
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JGI Launches Latest Strategic Plan
… and incubation process. “JGI’s ‘vision’ is truly a tour de force,” said Mary Maxon, Biosciences Associate … JGI advisory committees and its primary funders at the DOE Office of Biological and Environmental Research (BER), … our near- and long-term goals. And, by the way, as far as sequencing goes, the JGI’s next petabase will likely be …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research … what might happen for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Triggering Morel Fruiting
… and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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How Filamentous Fungi Sense Food
… importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to …
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Green Algae Reveal One mRNA Encodes Many Proteins
… zofingiensis . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like … National Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Viruses Reprogram Cells into Different Virocells
In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are … science initiative between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Nick Everson
JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab … after serving as the Chief Operating Officer of the DOE Joint Bioenergy Institute and the Operations Deputy for … space and facilities, finance and procurement, human resources, safety, and administrative activities. The Deputy of …
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Accelerating Metagenomics Discoveries with Deep Learning
… learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than … recognition: for example, a camera’s ability to recognize your face and distinguish it from your friend’s. Biologists … a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… food webs in cold, but fecund polar waters. “A lot of our food comes from the North Atlantic, North Pacific and … led by UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science …
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