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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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Boosting Small Molecule Production in Super “Soup”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The work started with yeast strains engineered by Alper’s team to convert the sugar glucose to the products including … of the yeast’s native glucose metabolism Alper’s graduate student Xiunan Yi visited the Jewett lab to provide a …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds … et Technologies (FRQNT) for Québec Océan and an FRQNT Team grant to C.L. The analyses were conducted using Digital …
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Boosting Small Molecule Production in Super “Soup”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The work started with yeast strains engineered by Alper’s team to convert the sugar glucose to the products including … of the yeast’s native glucose metabolism Alper’s graduate student Xiunan Yi visited the Jewett lab to provide a …
Learn more
Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Steck, Ning Sun, Olena Vatamaniuk, Setsuko Wakao, Meng Wang, and Allison Werner.   A total of 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative … environment. Users and members of their research teams work onsite at TMF alongside facility experts to …
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Doubling Down on Known Protein Families
… at protein function within them. The work was led by a team of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … novel genes.  They took what they were left with and clustered them into families. From there they focused on …
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A Natural Mechanism Can Turbocharge Viral Evolution
… target on the microbial cell’s membrane. Two decades ago, a team discovered a group of viruses that had in their genomes … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … data, approximately half of which was generated by the JGI, to uncover these DGRs. DGRs were found in single …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology … was a multi-institutional effort led by then-graduate student Cory Schwartz and his advisor Ian Wheeldon, a … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … this shattering trait – referring to the moment when the cluster of seeds at the tip of each branch breaks apart so … the plant to be collected.  Association mapping led the team to identify a gene called Less Shattering 1 (SvLes1); …
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The Case for Conservation
… question. In a recent Scientific Advances article , a team led by McDaniel and his former graduate student Sarah Carey, now at the HudsonAlpha Institute for … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how …
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