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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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THE Bioenergy Tree
… them tantalizing plants to harness for bioenergy. In this episode, hear from Oak Ridge National Laboratory scientists …
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A Natural Mechanism Can Turbocharge Viral Evolution
… The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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Igor Grigoriev
… National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the …
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JGI Workshops at PAG
… in the bioenergy and biotechnology potential of algae, and sampling of the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this Workshop is to …
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Work With the JGI! Tips for a Winning CSP Proposal
… up – in January, March, and later on in the spring. In this episode, hear proposal tips from Tanja Woyke, who runs user …
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JGI@25: From Life at the Extremes to Editing Genomes
… Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright …
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Gotta Catch 'Em Gall
… to raise their young in structures called galls.  In this episode, hear from Kasey and Patrick about how this project …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… though, many viruses have been somewhat invisible to the sampling experiments probing Earth’s ecosystems. Viruses … because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … The work is supported by NIH Common Fund grant 1U24HL175772-01. This is not the first time Kyrpides and his …
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What Happens To a Rainforest When You Dial Up Drought?
… key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at what happens to that …
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