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JGI Launches Latest Strategic Plan
… milestones. JGI Director Nigel Mouncey credits JGI Science Program Deputy Axel Visel for driving the monumental effort, … our Berkeley Lab colleagues, particularly with the other user facilities including the Advanced Light Source, the …
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JGI Welcomes New UEC Members
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their access to technical capabilities JGI offers, …
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The Power of One, Amplified
In recent years, advances in sequencing technologies and bioinformatic tools have helped decode the genomes of tens of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Robert Bowers , a JGI scientist within the Microbial Program, led the genomic analyses to compare the resulting …
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Using BLAST to Teach “E-value-tionary” Concepts
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A Guide to Gene‐Centric Analysis Using TreeSAPP
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SPRUCE-ing Up Science
… the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a postdoctoral researcher at the … despite global warming.  At ORNL, Lawrence brings a bioinformatics expertise, a combination of biology and computer … to develop a tool that leveraged machine learning to help users determine which computer program would best serve …
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The Case for Conservation
… so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how lessons from … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Streamlining Regulon Identification in Bacteria
… coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … any particular factor. Predicting those relationships bioinformatically is almost impossible, and the experimental … Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey leads. RIViT-seq is a three-step …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and … DOE Office of Science as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Laboratory, built off past … biosynthetic gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( …
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The More the Merrier: Making the Case for Plant Pan-genomes
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … transformed, traits that make them easy to work with bioinformatically and in the laboratory. “We are fortunate … the study, partly enabled by the JGI’s  Community Science Program , the team generated reference genomes for  B. …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, reached this milestone with … JGI Science Deputy and a co-founder of the internship program, this type of achievement is especially rewarding. … Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of the fittest” theory — …
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