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Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 150 archaeal viruses had been previously identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to …
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CSP Large Scale Call
… that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … Proposers are encouraged to review the JGI’s sample requirements . Samples that are not available …
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An Addiction Crucial to a Fungus’ Reproduction
… and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC … Fungal Genomes project. As reported in the November 29, 2017 issue of Nature Communications , the team found that …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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First Monoploid Reference Sequence of Sugarcane
… polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI was part of an international team led by researchers … in sorghum. Based in part on these positive results, in 2017, JGI approved a CSP proposal from the international …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The … genotypes by Dr. John Mullet; Dr. Tom Juenger and his postdoc Xiaoyu Weng from Univ. of Austin, who previously led …
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Frederik Schulz
… and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … (MIUViG). Nature Biotechnology 37, 29–37. Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose … responsibility and accountability Promote utilization of JGI products and services while nurturing a fresh cohort of …
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Steven Wilson
… applications that span the lifecycle of activities at JGI - proposal submission and review, project and work order … align and reach the associated goals. Mr. Wilson joined the JGI in 2002.  A fter supporting the sequencing core at Exelixis Biopharmaceuticals as an intern, he joined the JGI as an Instrumentation Engineer where he added structure …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science … security. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries … & Informatics. The JGI also sustains a vibrant community of postdoctoral and early career researchers. …
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