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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. … sequencing, integrative -omics, and data mining, empowering research collaborators to take on ambitious synthetic … Genomics-enabled analysis of specialized metabolism in bioenergy crops: current progress and challenges , details …
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Gotta Catch 'Em Gall
Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer …
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A restricted spectrum of NRAS mutations causes Noonan syndrome
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… tolerance, and other traits that make it a viable candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and … using switchgrass samples from these gardens, a team led by researchers at the University of Texas at Austin produced a … of field data and genetic information has allowed the research team to associate climate adaptations with …
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Fungal Friends or Foes in Plant Roots
… fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize … can in turn boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office … group at the Max Planck Institute for Plant Breeding Research (MPIPZ) studied how fungi associate with roots in …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… your career, I witnessed you design and model what great research support is at the Laboratory.” Chief Counsel Jeff … of the DOE Office of Biological and Environmental Research: Sharlene Weatherwax; Associate Director of … Division and then to Chief Operating Officer for the Joint BioEnergy Institute and Deputy for Operations Biological …
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Accelerating Metagenomics Discoveries with Deep Learning
… assemble and interpret. The workshop aimed to showcase how researchers are utilizing deep learning to automatically … using HMM profiles of protein domains from the pfam database to test the efficacy of a particular kind of deep … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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The More the Merrier: Making the Case for Plant Pan-genomes
… many plants, including agricultural staples and candidate bioenergy feedstock crops, are recent polyploids. Crop … traits. Given the importance of polyploidy in plants, researchers have sought to learn the origins, evolution and … B. stacei and  B. distachyon , a relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All …
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Identifying the gluc-1 and gluc-2 mutations in Neurospora crassa by genome resequencing
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Rapid whole-genome mutational profiling using next-generation sequencing technologies
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Three mutations repurpose a plant karrikin receptor to a strigolactone receptor
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs … and Oregon. The cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor of  DOE’s Center for Bioenergy Innovation (CBI) at Oak Ridge National Laboratory. …
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