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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… coexist is key for understanding their impact on wider ecosystems, but these symbiotic interactions are difficult … the Earth’s surface, within the crust, there is a vast ecosystem connected to the global carbon cycle. Archaea are … and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… as was previously thought. Instead, it turns out this fern has been co-opting genes from bacteria. Schmutz was also … into the nuances of the plant’s genome . A candidate bioenergy feedstock, switchgrass has adapted to expand its habitat range —but at what cost?  …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform scientists and researchers … annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from their … metagenomes. The work is of interest to the Department of Energy (DOE) Office of Science’s Biological and …
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Alabama Agricultural & Mechanical University Internship Program
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Computationally Classifying Fungal Lifestyles
… Summary A team led by researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … at Lawrence Berkeley National Laboratory (Berkeley Lab), has generated a more accurate phylogenetic tree tracking the … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward …
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Viruses Reprogram Cells into Different Virocells
… these infections can affect the interactions within their ecosystems. Summary Microbes drive the energy and nutrient cycles that fuel the planet, and viruses … science initiative between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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Mike Sneddon
… library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published … Arkin, AP, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature Biotechnology … 566–569 (2018). Sneddon, MW, Pontius, W, and Emonet, T. Stochastic coordination of multiple actuators reduces latency …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing … They are abundant representatives of deep subsurface ecosystems. A team of researchers described how the viruses … and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight … been approved through the annual Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… they are, and the roles that they might play in the wild, hasn’t been clear. Now, to answer these questions, a team led by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … at Lawrence Berkeley National Laboratory (Berkeley Lab), has looked for DGRs in a broad range of publicly available …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal … Technologies Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … said Jewett, one of the study’s senior authors. “But this has been done most commonly in bacterial-based systems, and …
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User Executive Committee Charter
… qualifications, and terms of service Any investigator who has been an active user of the JGI at any time in the past …
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