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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … single-cell profiling methods, including single-cell RNA-seq, single-cell ATAC-seq, and spatial transcriptomics … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding how … National Institutes of Health’s (NIH)  Common Fund Human Virome Program .  Nikos Kyrpides , head of the JGI’s  …
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CSP Large Scale Call
… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based … capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, and biogeochemistry — … and analytical capabilities. All proposals will be externally peer-reviewed for scientific merit, DOE mission …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … or citation of accession numbers in a peer-reviewed journal, or any public deposition of the data at outside …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … a diversity of views and opinions; Exercise tolerance for diverse ideas and a commitment to free inquiry based on …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … beautiful. Sorry about that! They’re actually beautiful and diverse organisms. And they also have a rich chemistry. And … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … . And then coming up after that, we’ll have a lineup of international scientists who also do genome mining. We’ve got a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And so I ended up as a postdoc Panama as part of the international cooperative biodiversity group (ICBG) based in … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform …
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Partners
… our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI …
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