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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… that were acquired through it were usually only around 30% complete.  Described in  ISME Communications , a method … of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is … of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. Dr. Charles Gawad has been supported for this work by a …
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Events
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the next five years. It also includes more than 130 implementation milestones to help track and drive … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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Microbiome Data Science Team
… and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from the human gut microbiome. … bacteriophage community.  Nat Microbiol. 3(9):1023-1031 Harrington LB et al. (2017) A thermostable Cas9 with …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US … of Energy (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported under contract no. DE-AC02-05CH11231. …
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Crysten Blaby-Haas
Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s Recognition Award for Science, 2020 NIH … to carbon metabolism in cyanobacteria. Nature Comm 15:3167. Hammack AT, Blaby-Haas CE. (2024) Machine learning … aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature 608, 38-39 (2022) and …
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Ben Bowen
NIH K25 Mentored Career Development awardee 1998-2003: NSF Graduate research training fellowship in biomolecular … spectrometry imaging. Analytical chemistry, 89(11), 5818–5823. Baran, R., Brodie, E., Mayberry-Lewis, J., Hummel, E., Da … computing and metabolite atlases. Metabolites, 5(3), 431–442. Yang, J., Rubel, O., Prabhat, Mahoney, M., & Bowen, …
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Data Ecosystem
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the … as well as biotechnology. NeLLi August 24 – 25, 2023 Session Speakers:   Laura Hug , University of Waterloo …
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A Community Resource for Secondary Metabolite Researchers
… public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it … of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is … of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database available …
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Uncovering Novel Genomes from Earth’s Microbiomes
BGCs in  IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome … which had not already been associated with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics Researchers …
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JGI Welcomes New UEC Members
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