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Natural Prodcast Episode 9: Roger Linington
… Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … environmental roles of these compounds? Can we perform studies such as looking at the distributions of different … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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A Sorghum Pangenome Opens More Doors to Discovery
… addition to bolstering sorghum fields, understanding this plant eventually offers avenues for translating its … to build this pangenome, including a reassembly of the BTx623 reference genome. This cultivar has been the reference … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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A Community Resource for Secondary Metabolite Researchers
… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The … BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. …
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Resequencing and annotation of the Nostoc punctiforme ATTC 29133 genome: facilitating biofuel and high-value chemical production
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CSP Large Scale Call
… work will NOT be considered under this program. Plant pathogens will only be considered if they are of relevance to bioenergy-related feedstock crops or model plants. Projects targeting marine systems must clearly …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology … of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei sequencing … regulation at the level of individual cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional …
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Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages
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Natural Prodcast Episode 22: Alison Narayan
… what the majority of them do. We have in-depth biological studies on a sliver of the molecules nature provides to us. … has to do with the mechanism. And so these enzymes use O2, and one of those oxygen atoms gets incorporated into our product, and one of those oxygen atoms from O2 ends up as a molecule of water. DAN UDWARY: Mhm. So …
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Visual Comparative Omics of Fungi for Plant Biomass Deconstruction
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Brachypodium: A monocot grass model system for plant biology
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