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JGI@25: From Life at the Extremes to Editing Genomes
… ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and … Such proteins have been adapted for therapeutic application development by Mammoth Biosciences, one of several companies … and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of …
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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs … 9 (1), 1-9 Roux et al. (2018) Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… peer through the waters and clouds of insects hover just above. Described as a “river of grass” that stretches … to apply the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall … northern Everglades in Palm Beach County, and particularly about the microbes that play roles in the methane cycle. …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Biochemistry, Microbiology) Jeremy Schmutz (Cross-field) Susannah Tringe (Microbiology) Tanja Woyke (Biology and … Roux, along with data from a consortium that included Susannah Tringe and Tanja Woyke, were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … of the plant, that eelgrass began colonizing the oceans  about 3 million years ago. The study shows that figure is …
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The JGI Data Portal: Improving User Experience
… between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download … processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal … team started small, in the tradition of agile design and development,” said Linda Setchell, a Truss product manager …
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JGI Announces 2025 New Investigator Portfolio
… novel research projects from PIs who have not led any previously accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with a widening circle of … November 2025 review. You can also find more information about the JGI’s  various proposal calls here. …
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DOE JGI Interns Share Their Summer Experiences
… part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two … groups, respectively. Each of the interns spoke briefly about their time at the JGI at … Merced Genomics Distinguished Graduate Internship Program, Susannah Tringe and Axel Visel hosted Imelda Forteza and …
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JGI & KBase at PAG XXVII
… by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to … with the JGI Community Science Program, and how you can use the KBase system to accelerate your plant genomics … Research (BER) Plant Genomic Science on current and ongoing developments toward integrative biology. Researchers who are …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The Science Through … technologies and computational approaches, more and more virus sequences are being recovered and identified from … assessment, host prediction, and phylogenetic analysis. The development of CheckV helps researchers to assess the …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how they deter … this approach would also allow researchers to learn more about what is and is not modifiable in crops, which can help …
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate … bacterial diversity. The team conservatively estimated that about 42% of the bacterial diversity has no genomic …
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