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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to … other words, some like it hot; some do not. “We can think about the ocean, naively, as a sort of homogeneous medium. … Panel on Climate Change (IPCC) 5th Assessment Report to predict where and how fast the 14° Celsius …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th … genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel Sussman and dedicated at our 2022 Annual Meeting.  … Notable …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the … Summary As the planet has changed, so have plants. Curious about their ability to adapt to changing environments, … no. 101001675-ORIGINS) and from the FRM/FSER (FRM/FSER202302017064) to P.-M.D., from the CNRS to P.-M.D. and H.P. …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the potential of this collaboration stating, “We … the Advanced Light Source, future collaborative research projects were also intensively discussed. The Berkeley …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… collection sourced from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … genome using samples collected at these gardens. Building off this work, researchers at three DOE Bioenergy …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) … your proposal idea with JGI staff to clarify key points about JGI’s capabilities, technical feasibility, and … science and well-thought-out questions. We are looking for projects that can’t easily be done at a core facility, but …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… amount of biomass which could then be converted into sustainable biofuels . For its importance to the DOE mission, … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked about a multi-year study his student conducted involving …
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How to Target a Microbial Needle within a Community Haystack
… targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and … traditional shotgun metagenomics approach to learning more about environmental samples starts with researchers first … User Facility, is supported under Contract No. DE-AC02-05CH11231. This study was funded by the Max Planck Society. …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought … and other staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as representatives …
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Jeremy Schmutz
… years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for … Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and … A., Plott, C., MdS Hossain, J. T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome …
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Nandita Nath
… methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, … Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with …
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