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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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DOE JGI Interns Share Their Summer Experiences
… briefly about their time at the JGI at http://bit.ly/JGI15summerinternsvids . Click here to check out photos of the interns. For this second year of the DOE JGI/University of California, Merced …
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Four Draft Single-Cell Genome Sequences of Novel, Nearly Identical Kiritimatiellaeota Strains Isolated from the Continental Deep Subsurface
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A Genome-Wide Scan for Evidence of Selection in a Maize Population Under Long-Term Artificial Selection for Ear Number
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Forming Scientific Connections and Building Community
… interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … – were selected to continue their research over the school year.   …
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Jeremy Schmutz
… and co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the human genome … simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, … kingdom. Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid …
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Igor Grigoriev
… the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he … Nature Ecol Evol . 6(7):965-978. Grigoriev et al (2021) PhycoCosm, a comparative algal genomics resource.  … Nucleic Acids Res. 49(D1):D1004-D1011 Swift et al (2021) Anaerobic gut fungi are an untapped reservoir of …
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Game On: High School Students Drive Everglades Metagenomics Study
… of 2018, Jonathan Benskin was preparing to teach a second year A-Level Advanced International Certificate of Education … answers being, “It would take a team of Ph.D.’s over a year to do a project at this capacity.” Jonathan’s thought … devices, then planned and collected from 4 sites with 5 replicates. They extracted the DNA from the soil with …
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Matt Blow
Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer genetics. Dr. … Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer … Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. 2021. Persistence and plasticity in bacterial gene …
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Kjiersten Fagnan
Microbiol 18, 313–314 (2020). https://doi.org/10.1038/s41579-020-0377-0 S. Pau and J.B. Bell and A.S. Almgren and … Extreme-Scale Computing Conference . … UC CORO participant, 2021 Member of the Networking and Information Technology …
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Mindfully Moving JGI
… sequencing labs in Building 100 were silent. Twenty years after the JGI united the genomics expertise of three … Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 single-story buildings … miles away in another city and county began more than three years ago. For JGIers, the moving process began in 2017 with …
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