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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … global ecological and environmental processes, especially by modifying host cell metabolism and altering cell fitness. …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … DGR could mutate the virus’ tail fiber proteins, and thereby allow them to embrace different cells. Since that … of more than 30,000 DGRs in this analysis, a 20-fold increase over what was previously known, throws open the doors …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… yeast to efficiently convert elements present in urine to create hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome Institute and the Molecular Foundry – both located at …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Benjamin Cole
… interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants … temperature oscillations throughout the day. At the Joint Genome Institute, Dr. Cole’s research focus has been on …
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Supporting Global Research into Actinomycetes
… a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … its Secondary Metabolites research group . That group, led by JGI Director Nigel Mouncey, has launched its  Secondary … to one another. The aim of ActinoBase, originally launched by the UK’s John Innes Centre, is to connect the global …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by lifestyles. The machine “learned” to identify data …
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JGI on the 2020 Highly Cited Researchers List
… Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true pioneers in their fields … a consortium that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  … to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples around the …
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Charting Progress toward Professional Goals
… with an experienced researcher who serves as their mentor. By contributing to projects that will help them build skills … through three different internship programs – some managed by the Lab – to learn more about their experiences. Jehan … CalTeach initiative. During their time at the Joint Genome Institute, they interacted with interns from other …
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JGI Workshop at SIMB NP Meeting
… a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI at the AGU Fall Meeting
… through a single research proposal: Maximize Your Research by Harnessing Multiple Scientific User Facilities in One … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …
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