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… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … B.G.P. was supported by the Marine Biological Laboratory, by the National Science Foundation’s XSEDE computing …

… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … of conifers–limber pine, Douglas fir and Engelmann spruce–to learn more about conifer needle microbiomes. The survey … in part by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without …

… & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the … Metabolomics Platform Blake Simmons for The BioManufactory Completed VFP applications are due on January 12, 2022. …

… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … 566–569 (2018). Sneddon, MW, Pontius, W, and Emonet, T. Stochastic coordination of multiple actuators reduces latency …

… operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She … novel flow cytometry protocols for targeted recovery of specific microbes. …

… the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …

… marine microbes and by extension, the ocean’s capacity to act as a carbon sink. Summary As global temperatures … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the …

… Click the cards below to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  …

… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …