Search

Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards …

Metagenomic datasets could help map out microbial diversity … to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team found that …

Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux are part of … to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  …

… within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal contained … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database …

Waldo will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists … use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 …

Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those … aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an international research …

… at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  Microbiome … funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 …

… including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …

… by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search … do so, they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. …

… of the latest call , a total of 70 graduate students from 52 universities were selected to carry out part of their thesis research at 12 host national laboratories or facilities between 3-12 … plans to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around …