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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida … was happy to offer advice but declined to offer actual scientific help,” said Jonathan Benskin, who teaches the … JGI does not only contribute to the body of current scientific knowledge, they are also equipping the next …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, … and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. doi: 10.1021/acschembio.8b01107. Epub 2019 … see this  Metabolomics Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. … be engineered. “Piloting access to this emerging technology with JGI users will enable us to assess CRAGE’s impact, … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing … chemoinformatics, and bioinformatics facilitates impactful scientific discoveries, supporting the DOE’s Biological and … Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for Exceptional Achievement …
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What Happens Underground Influences Global Nutrient Cycles
… Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national … being conducted through the  Belowground Biogeochemistry Scientific Focus Area (SFA), supported by the Terrestrial … experiment in the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … rice in 2002) and the first C4 crop to be fully analyzed. 2014: The JGI updates its Sorghum bicolor reference genome and …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the … quality of those genomes, is rising. The purpose of this Workshop is to illustrate the expansion of this field and …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to … in machine learning. Despite working alongside his scientific idols, Lawrence recalls feeling very comfortable. … said. Wang, a vocal advocate on the importance of giving scientific presentations, maintains this expectation of his …
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Mapping the Earth’s Hidden Fungal Kingdom
… have diversified into an estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … educational partners, citizen scientists and the fungal scientific community as "potential routes to improve …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. … Laboratory (Berkeley Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome … between JGI and the ExaBiome team. “They produced fantastic scientific results this year by assembling a collection of …
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Leo Baumgart
… joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … team responsible for piloting and operationalizing new genomic technologies, integrating automated liquid … pipelines to transition bench-scale methods into production workflows. He developed and scaled the multiDAP-seq assay, a …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, … Genomes and DOE relevant cellulosic feedstocks. He provides scientific project management for the reference eukaryotic … Nature Plants 3:17054. Schmutz, J, & McClean P et al. 2014. A reference genome for common bean and genome-wide …
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