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Mindfully Moving JGI
… 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one long … Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained … crated, shipped to, and then installed at the  Integrative Genomics Building , JGI’s newly-built home located in the …
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Better Living Through Bioenergy
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The Case for Conservation
… advances in sequencing technologies applied to the effort. The Impact Found on all continents, including … could lead to the discovery of genes that could be used for multiple biotechnological applications. These … an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the University of Florida, an …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo … Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer … have done the groundbreaking work you’ve been reading about for years! And you can ask them about it! And they’re super …
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You Can Move, But You Can’t Hide
… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … the National Microbiome Data Collaborative’s EDGE platform. The Impact In order to gain more insights into Earth’s … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine … nature's chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant … response that had never been mapped in this detail before.     The Impact By revealing how a single stress signal …
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Jeremy Schmutz
… with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for … Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid …
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Crysten Blaby-Haas
… joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … Services Honoree, 2022 Peter-Boyer Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… their collaborations. One review article in the collection, Genomics-enabled analysis of specialized metabolism in … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo … DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to test enzymatic …
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Building Wet and Dry Lab Skills
… students coming to the DOE Joint Genome Institute for research and training experience funded by a DOE … mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium … the supervision of their mentors, they were responsible for all steps of the experiment from growing and inoculating …
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Styling for Safety: PPE, It’s the JGI Way
… Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy … address some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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