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The amphioxus genome illuminates vertebrate origins and cephalochordate biology
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Hardwood Tree Genomics: Unlocking Woody Plant Biology
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Entities inside one another ‐ a matryoshka doll in biology?
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Sharing Structure and Function in Biological Design with SBOL 2.0
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Giant virus biology and diversity in the era of genome-resolved metagenomics
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … the research community brings together the data resources enabled by the DOE Biological and Environmental Research …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … The JGI recognized this opportunity early, developing standardized workflows to produce high-quality, comparable …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … unrestricted). The Data Portal presents the users with the standard  JGI Data Release Policy information when they … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE … Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data … also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team … support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for science.  Dr. Sneddon is an … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint … We’ll talk about that when we talk about molecular biology.  But um, yeah, so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … Episode Transcript …
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Crowdsourcing and curation: perspectives from biology and natural language processing
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