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Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the co-authors and key developers of the … Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. Chen is currently the …

… work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …

… year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …

Congratulations to Jane Grimwood, who has been appointed the … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood …

My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium …

JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that … factors bind in the genome. A key aspect of the project is understanding what TFs and regulatory networks …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and … Genomes (IMG) data management system … As part of this project, pairwise average nucleotide identities (ANI) and …

… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, … classroom modules Testimonials: … A primary purpose of this project is to bring educators from a broad range of …

… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports … we worked on the Salinospora genomes. That was a really fun project. We had Brad on and he kind of waxed poetic about …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … benefits. DAN: Now, you and I are working together on a project at the JGI to try to find new enediyne clusters and … produce them. Do you want to talk a little bit about that project and how that got started? BEN: Yeah, so I want to …