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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in … team conducted several large-scale field experiments and analysis to find relationships between sequence variation …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of … sets of chromosomes inherited from each parent. It also has 700-fold greater contiguity, meaning the genome is …
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Morphological and Genomic Features of the New Klosneuvirinae Isolate Fadolivirus IHUMI-VV54
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The … from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the genomes and … This work was supported by the United States Department of Agriculture National Institute of Food and …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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The integrated microbial genomes system: an expanding comparative analysis resource
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including … and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, … Plant microbiomes hold the amazing ability to influence plant …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of … bioinformatics pipelines and a laboratory information management (LIMS) system. He previously led the NGS Software … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. L. B., Hwang, W. W., Kim, J. …
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Massie S. Ballon
… Massie S. Ballon is the Communications and Outreach Manager … public resources and the DOE mission, as well as help cultivate the next generation of genomic research users, … crafting technical reports, developing educational content, and writing feature profiles. She is one of the …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein … The IMG suite is a community resource for comparative analysis and annotation of all publicly available genomes in … This work was supported by the Department of Energy (DOE) Office of Biological and Environmental …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation could look … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … high school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators … through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley Eloe-Fadrosh , who heads the  …
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