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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … is displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … through which sorghum is equipped to deal with adverse environmental conditions, researchers hope to improve yields … nearly 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed …
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New and Improved: Eucalyptus Reference is Now Accessible
… a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … of Energy (DOE) Office of Science Biological and Environmental Research program to provide the fundamental … South African team collected the plant tissues. DNA and RNA sequencing were conducted by the JGI, along with genome …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … to enable great science that will help solve energy and environmental challenges. The 1KFG project represents … “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. Proposals are accepted …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The … through the  Community Science Program , using long-read sequencing to assemble the repetitive areas of the complete … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … from industrial enzymes discovered in extreme environments to engineered microbiomes that accelerate biomass … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards … and begin the work of understanding how engineered environments contribute to greenhouse gases,” Kaze said. “It’s … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … that allow the organisms to adapt to and control their environment. Many secondary metabolites are produced by groups … BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The …
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Expanding Virophage Diversity
… with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses … with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Almost all known virophage … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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JGI announces first round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program.  Below find a list of the first 10 researchers accepted for 2023. Proposals are …
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Webinar: Introducing the BioSANS capability
… Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to … University in St. Louis on “Solar Energy Conversion in Cyanobacterial Membranes” Marcus Foston, Washington University in … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       …
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