Search

… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. … on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. …

… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … and developed new tools to map that soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the … (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes … (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium from a …

… genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from previously understudied … proteins, and virus diversity in this group expanded 10-fold, offering the opportunity to refine the phylogenetic …

… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. … fields. A public repository of 52,515 microbial draft genomes generated from environmental samples around the …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed …

… An improved genome assembly to support targeted tree breeding for the …   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances compared to … Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …

… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups … specific database of IMG/VR (Viral Resources.) Launched in 2016, IMG/VR is the largest publicly available collection of …

… the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese eelgrass crossed the … form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the ancestor to eelgrass underwent a whole genome duplication event, doubling all of its chromosomes.  …

… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a … kinds of supplies in the quest to break down plants.  In 2016, her team leveraged transcriptomics and other assays to …

… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. … by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …