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… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of …

… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … workflows that allow researchers to easily analyze viral genomes. This includes (i) classifying viruses into groups … specific database of IMG/VR (Viral Resources.) Launched in 2016, IMG/VR is the largest publicly available collection of …

… the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese eelgrass crossed the … form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the … Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and evolutionary genomics of …

The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … Bioinformatic Approach to Discovering Promoters Regulating Poplar Drought Response 7:27 PM Highlights from Genome of …

… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed …

Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director … group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the faculty of University of …

… switchgrass ( Panicum virgatum ), which has established 10 experimental gardens located in eight states spread … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and those previously grown for the DOE candidate feedstock poplar. “You’re collecting natural diversity and you’re …

… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a … kinds of supplies in the quest to break down plants.  In 2016, her team leveraged transcriptomics and other assays to …

… techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … Brachypodium. Genetics, 223 (2), art. no. iyac146 DOI: 10.1093/genetics/iyac146 Gordon, et. al. 2020 Gradual … Genetics and Genomics of Brachypodium. 2016 Vogel, J.P. Ed., Springer, Switzerland. ISBN: …