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Partnerships: Adopt-A-Genome
… some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other …
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Webinars on Offerings & Capabilities
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Natural Prodcast Episode 10: A Primer on Genome Mining
… if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence being taking a …
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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1
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JGI Advisory Committees Code of Conduct
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Cataloging the Microbes that Manage the Health of River Systems
National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols … Area (RC-SFA) at Pacific Northwest National Laboratory (PNNL) and funded by the DOE BER Environmental System Science … were also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at …
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Three Join the JGI User Executive Committee
… full roster of members. Couvilion is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She … and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA … a breadth of institutions, research topics and career stages. The election period concluded on January 8, 2024. …
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JGI@25: Solving the Mystery of the Missing Oil
Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab … Fellow at the Pacific Northwest National Laboratory (PNNL). The JGI also helped track and characterize the …
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You Can Move, But You Can’t Hide
… currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to … (LBNL), 89233218CNA000001 (LANL), and DE-AC05-76RL01830 (PNNL). …
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JGI Workshops at PAG
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What Happens Underground Influences Global Nutrient Cycles
Jason McDermott of Pacific Northwest National Laboratory (PNNL). The proposal focuses on an aspect of the  Phenotypic … the Soil Microbiome to Environmental Perturbations   under PNNL’s Soil Microbiome SFA, which aims for a systems-level …
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Single Cell Research Group
… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential … virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …
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