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… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … microorganisms, by sequencing large populations of bacteria and archaea in their natural environments using …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … diversity and integrating various data types to explore the molecular mechanisms behind phenotypic evolution. It also …

… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … is by comparison. We’ll talk about that when we talk about molecular biology.  But um, yeah, so secondary metabolism is … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …

… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to … (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to recover, reuse, and transform …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be … provides customized analysis, the JGI also participates in publication of results. …

… JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI … Tips for High Molecular Weight DNA extraction: …

… we want to talk about Antarctica, and we want to talk about molecular networking, because I really enjoyed the review … there have been huge advances in both. The cool thing about genomes is you can, well, if your assembly is good, you can … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … and storage (from PacBio) Best practices for High Molecular Weight DNA extraction and quality control (from …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … and Operations teams to enable the JGI’s focus on expanding molecular capabilities and functional genomics, scaling … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …