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Natural Prodcast Episode 17: Cassandra Quave
… Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week is Professor Cassandra Quave … has a book called The Plant Hunter and I’ve read all 400 pages of her life and I feel like I have a new friend that … I also feel like Cassandra Quave has put herself on the page and made herself really knowable through her book. And …
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Natural Prodcast Episode 7: Ben Shen
… metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a month now since … with them. DAN: So, here we go. Natural Prodcast episode 7, our talk with Ben Shen.  DAN: Alison, we’re not in … compound that people know, as a family, it’s more than 7 decades. So, this family of substances is always …
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Natural Prodcast Episode 2: The Primer, Part 2
… but traditionally, somewhere in the neighborhood of 60 to 70% of all of the medicines that we use are natural … to find something new. That started decreasing around the 1970s, you can see on the chart, and then things get a little …
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Natural Prodcast Episode 14: Nigel Mouncey
… was bioengineering bio-process R&D, BBRD, a group of about 75 people. So our biggest project was the spinosyn family of … 30 to September 1st. The link is found all over JGI’s web pages.  DAN: And I will put it in the show notes along with … Metabolites Science Program . Since his arrival in 2017, Nigel has led a vision for the JGI that sees secondary …
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Natural Prodcast Episode 22: Alison Narayan
… library within that family as possible. There’s one more category of sequences that we worked with JGI on, and those … PNAS.  2023,  120, e2218248120. doi : 10.1073/pnas.2218248120 …
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10 From JGI on the 2019 Highly Cited Researchers List
… to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & Animal Science category Plant Program Library Construction Group Lead Jane … of the JGI plant portal Phytozome, which is overseen by 2017 Highly Cited Researcher David Goodstein. Go here to learn …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in finding your … is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about NRPS’s that … Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) DAN UDWARY: Yeah, I think that might be a good …
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Matt Blow
… Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer … Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. 2021. Persistence and …
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JGI Portals
… upgrades . We regret any inconvenience. Effective July 27, 2026, the JGI will move to a new login service, requiring …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring …
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FICUS
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Natural Prodcast Episode 3: The Primer, Part 3
… 3 of the Primer! — DAN: So, you know, in the in the 50s 60s 70s, most of the exploration of this is done by what’s … product molecules was starting to decline around the 70s. It’s really very, very low these days. So maybe one or …
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