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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … finished product depend on genome. Selected genomes will be improved based on feasibility and scientific merit Assembly, … ( IMG ) 280/298 Microbial Improved Draft, Isolate High quality draft assembly of long-read sequence data, …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … but in subtle ways that affect fitness. And so, doing a high level kind of analysis, you just might not be able to …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to …

… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … such as those involving biosynthetic clusters, or high complexity combinatorial libraries.  We have developed and continue to improve automated assembly pipelines bringing in new …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters … tools that enhance biofuel production and biosystem design. High-throughput design and synthesis capabilities accelerate …

… to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … by environmental change, focusing on plant resilience — highlighting the vulnerabilities of monocultures and the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… least a certain level of similarity. So if similarity was higher than a certain kind of volume. And if you do that, … that you would get from a sequence alignment, so quite high resolution information. But it doesn’t actually require you … especially across species that might be a little bit more genetically distant where the BGCs may have drifted but they …

… and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  … can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …