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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … elements are  proposal Award DOI(s), JGI’s ROR ID number, DOE contract numbers Please include the appropriate Auspice …

The Metagenome Program uses advanced sequencing technologies to … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … is based on 98% of the total available hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …

… to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access to all JGI genomic databases and analytical tools for all JGI …

… data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is a … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable … energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to …

The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI contributions to advancing the frontiers of … below to learn about the science depicted. The two-story JGI mural was commissioned for the JGI’s 25th anniversary …

All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … In working toward a shared vision with members of the JGI advisory committees, we welcome and encourage openness, …

… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes …